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Home / Proceedings / Proceedings Of The Sixth International Conference On Intelligent Systems For Molecular Biology /

Book One

Contents

  • GeneExpress: A Computer System for Description, Analysis, and Recognition of Regulatory Sequences in Eukaryotic Genome

    Nikolay Kolchanov, Mikhail Ponomarenko, Alexander Kel, Yury Kondrakhin, Anatoly Frolov, Fedor Kolpakov, Tatyana Goryachkovsky, Olga Kel, Elena Ananko, Elena Ignatieva, Olga Podkolodnaya, Vladimir. Babenko, Irina Stepanenko, Ada Romashchenko, Tatyana Merkulova, Denis Vorobiev, Sergey Lavryushev, Yulia Ponomarenko, Alexay Kochetov, Gregory Kolesov, Victor Solovyev, Luciano Milanesi, Nikolay Podkolodny, Edgar Wingender, and Thomas Heinemeyer

    PDF
  • Advanced Query Mechanisms for Biological Databases

    M Markowitz Chen, I-Min A.; Kosky, Anthony; Szeto, Ernest; Topaloglou, Thodoros

    PDF
  • The Ribosome Scanning Model for Translation Initiation: Implications for Gene Prediction and Full-Length cDNA Detection

    Pankaj Agarwal and Vineet Bafna

    PDF
  • Identification of Divergent Functions in Homologous Proteins by Induction over Conserved Modules

    Imran Shah and Lawrence Hunter

    PDF
  • Segment-Based Scores for Pairwise and Multiple Sequence Alignments

    Burkhard Morgenstern, William R. Atchley, Klaus Hahn, and Andreas Dress

    PDF
  • Hierarchical Minimization with Distance and Angle Constraints

    John R. Gunn

    PDF
  • Genetic Algorithms for Protein Threading

    Jacqueline Yadgari, Amihood Amir and Ron Unger

    PDF
  • Modeling Protein Homopolymeric Repeats: Possible Polyglutamine Structural Motifs For Huntington’s Disease

    Richard H. Lathrop, Malcolm Casale, Douglas J. Tobias, J. Lawrence Marsh, and Leslie M. Thompson

    PDF
  • Computational Applications of DNA Structural Scales

    Pierre Baldi, Søren Brunak, Yves Chauvin, and Anders Gorm Pedersen

    PDF
  • Preface

    Janice Glasgow, Terry Gaasterland, Richard Lathrop, Tim Littlejohn, François Major, Manuel Peitsch. Christoph Sensen, David Sankoff

    PDF
  • A Surface Measure for Probabilistic Structural Computations

    Jeanette P. Schmidt, Cheng C. Chen, Jonathan L. Cooper, and Russ B. Altman

    PDF
  • The LabFlow System for Workflow Management in Large Scale Biology Research Laboratories

    Nathan Goodman, Steve Rozen, Lincoln D. Stein

    PDF
  • A Computational System for Modeling Flexible Protein-Protein and Protein-DNA Docking

    J. E Sternberg, Patrick Aloy, Henry A. Gabb, Richard M. Jackson, Gidon Moont, Enrique Querol, Francesc X Aviles

    PDF
  • Sequence Assembly Validation by Multiple Restriction Digest Fragment Coverage Analysis

    Eric C. Rouchka and David J. States,

    PDF
  • A Hidden Markov Model for Predicting Transmembrane Helices in Protein Sequences

    Erik L. L. Sonnhammer, Gunnar von Heijne, and Anders Krogh

    PDF
  • Calculating the Exact Probability of Language-Like Patterns in Biomolecular Sequences

    Kevin Atteson

    PDF
  • IMGT/LIGM-DB: A Systematized Approach for ImMunoGeneTics Database Coherence and Data Distribution Improvement

    Véronique Giudicelli, Denys Chaume, and Marie-Paule Lefranc

    PDF
  • Automated Clustering and Assembly of Large EST Collections

    David P. Yee and Darrell Conklin

    PDF
  • A Map of the Protein Space – An Automatic Hierarchical Classification of All Protein Sequences

    Golan Yona, Nathan Linial, Naftali Tishby, and Michal Linial

    PDF
  • A Statistical Theory of Sequence Alignment with Gaps

    Dirk Drasdo, Terence Hwa, and Michael Lässig

    PDF
  • Compression of Strings with Approximate Repeats

    L. Allison, T. Edgoose and T. I. Dix

    PDF
  • Prediction of Signal Peptides and Signal Anchors by a Hidden Markov Model

    Henrik Nielsen and Anders Krogh

    PDF
  • Bayesian Protein Family Classifier

    Kunbin Qu, Lee Ann McCue, and Charles E. Lawrence

    PDF
  • BioSim – A New Qualitative Simulation Environment for Molecular Biology

    Karsten R. Heidtke and Steffen Schulze-Kremer

    PDF
  • Phylogenetic Inference in Protein Superfamilies: Analysis of SH2 Domains

    Kimmen Sjölander

    PDF

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